{
  "_id": "6a1ee173b401979e73410a15",
  "Package": "dhga",
  "Type": "Package",
  "Title": "Differential Hub Gene Analysis",
  "Version": "0.1",
  "Date": "2016-08-31",
  "Author": "Samarendra Das <samarendra4849@gmail.com> and Baidya Nath\nMandal <mandal.stat@gmail.com>",
  "Maintainer": "Samarendra Das <samarendra4849@gmail.com>",
  "Description": "Identification of hub genes in a gene co-expression\nnetwork from gene expression data. The differential network\nanalysis for two contrasting conditions leads to the\nidentification of various types of hubs like Housekeeping,\nUnique to stress (Disease) and Unique to control (Normal) hub\ngenes.",
  "License": "GPL (>= 2)",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-20 07:03:07 UTC",
    "User": "root"
  },
  "Repository": "https://samarendra88.r-universe.dev",
  "Date/Publication": "2016-09-06 08:12:54 UTC",
  "RemoteUrl": "https://github.com/cran/dhga",
  "RemoteRef": "HEAD",
  "RemoteSha": "732ad84d28fd53ffcf9d2846ca297913c62368ea",
  "MD5sum": "04f4788bb42a7efdecc5e168c633516f",
  "_user": "samarendra88",
  "_type": "src",
  "_file": "dhga_0.1.tar.gz",
  "_fileid": "5251b16f246b1d045953c732dcf53873b79e46b2f8b929f39abc3fed5d5c2c90",
  "_filesize": 167924,
  "_sha256": "5251b16f246b1d045953c732dcf53873b79e46b2f8b929f39abc3fed5d5c2c90",
  "_created": "2026-05-20T07:03:07.000Z",
  "_published": "2026-06-02T13:58:11.178Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79087903989,
      "time": 105,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7103367087"
    },
    {
      "job": 79087904095,
      "time": 99,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7103365294"
    },
    {
      "job": 79087903766,
      "time": 102,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7103373924"
    },
    {
      "job": 79087903303,
      "time": 108,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7103367486"
    },
    {
      "job": 79087902585,
      "time": 167,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7103337356"
    },
    {
      "job": 79087902613,
      "time": 116,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7359787141"
    },
    {
      "job": 79087904524,
      "time": 177,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7103387887"
    },
    {
      "job": 79087905033,
      "time": 71,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7103358150"
    },
    {
      "job": 79087904032,
      "time": 83,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7103360860"
    }
  ],
  "_buildurl": "https://github.com/r-universe/samarendra88/actions/runs/26146795759",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/dhga",
  "_commit": {
    "id": "732ad84d28fd53ffcf9d2846ca297913c62368ea",
    "author": "Samarendra Das <samarendra4849@gmail.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.1\n",
    "time": 1473149574
  },
  "_maintainer": {
    "name": "Samarendra Das",
    "email": "samarendra4849@gmail.com",
    "login": "samarendra88",
    "description": "",
    "uuid": 22776859
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.3.1",
      "role": "Depends"
    },
    {
      "package": "VennDiagram",
      "role": "Depends"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "samarendra88",
      "count": 1,
      "uuid": 22776859
    }
  ],
  "_userbio": {
    "uuid": 22776859,
    "type": "user",
    "name": "samarendra88"
  },
  "_downloads": {
    "count": 208,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/dhga"
  },
  "_mentions": 1,
  "_searchresults": 10,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/dhga.html",
    "manual.pdf"
  ],
  "_realowner": "samarendra88",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.1",
      "date": "2016-09-06"
    }
  ],
  "_exports": [
    "Adjacency",
    "DiffHub",
    "hub.pval.cutoff",
    "hub.wgs",
    "HubPlot",
    "HubStatus",
    "pvalue.hub",
    "WeightedGeneScore"
  ],
  "_datasets": [
    {
      "name": "rice_normal",
      "title": "The gene expression data of rice under control or normal condition",
      "object": "rice_normal",
      "file": "rice_normal.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "GSM345235",
        "GSM345236",
        "GSM345237",
        "GSM345241",
        "GSM345242",
        "GSM359902",
        "GSM359903",
        "GSM359904",
        "GSM359908",
        "GSM359909",
        "GSM359913",
        "GSM359914",
        "GSM359915",
        "GSM359919",
        "GSM359920",
        "GSM359921",
        "GSM540088",
        "GSM540089",
        "GSM540092",
        "GSM540093"
      ],
      "rows": 200,
      "table": true,
      "tojson": true
    },
    {
      "name": "rice_salt",
      "title": "The gene expression data of rice under salinity stress condition",
      "object": "rice_salt",
      "file": "rice_salt.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "GSM540090",
        "GSM540091",
        "GSM540094",
        "GSM540095",
        "GSM402999",
        "GSM403000",
        "GSM403003",
        "GSM403004",
        "GSM403007",
        "GSM403008",
        "GSM403011",
        "GSM403012",
        "GSM345238",
        "GSM345239",
        "GSM345240",
        "GSM345243",
        "GSM345244",
        "GSM345245",
        "GSM359905",
        "GSM359906"
      ],
      "rows": 200,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "Adjacency",
      "title": "Construction of Gene Co-expression Network",
      "topics": [
        "Adjacency"
      ]
    },
    {
      "page": "DiffHub",
      "title": "Differential Hub status of the genes in a gene co-expression network",
      "topics": [
        "DiffHub"
      ]
    },
    {
      "page": "hub.pval.cutoff",
      "title": "Identification of hub genes in a Gene Co-expression Network based on gene connection significance values",
      "topics": [
        "hub.pval.cutoff"
      ]
    },
    {
      "page": "hub.wgs",
      "title": "Identification of hub genes in a Gene Co-expression Network based on Weighted Gene Score",
      "topics": [
        "hub.wgs"
      ]
    },
    {
      "page": "HubPlot",
      "title": "Venn plot of hub genes under two conditions namely stress and control",
      "topics": [
        "HubPlot"
      ]
    },
    {
      "page": "HubStatus",
      "title": "Hub status of the genes in a gene co-expression network",
      "topics": [
        "HubStatus"
      ]
    },
    {
      "page": "pvalue.hub",
      "title": "Compuation of gene connection sigificance values in a Gene Co-expression network",
      "topics": [
        "pvalue.hub"
      ]
    },
    {
      "page": "rice_normal",
      "title": "The gene expression data of rice under control or normal condition",
      "topics": [
        "rice_normal"
      ]
    },
    {
      "page": "rice_salt",
      "title": "The gene expression data of rice under salinity stress condition",
      "topics": [
        "rice_salt"
      ]
    },
    {
      "page": "WeightedGeneScore",
      "title": "Computation of weighted gene score of genes in Gene Co-expression Network",
      "topics": [
        "WeightedGeneScore"
      ]
    }
  ],
  "_rundeps": [
    "formatR",
    "futile.logger",
    "futile.options",
    "lambda.r",
    "VennDiagram"
  ],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "dhga",
  "_universes": [
    "samarendra88"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1",
      "date": "2026-05-20T07:04:56.000Z",
      "distro": "noble",
      "commit": "732ad84d28fd53ffcf9d2846ca297913c62368ea",
      "fileid": "fb165858c8666f3220df38879f774c8ea7ee8348006faa63800807b81a8fc9a5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/samarendra88/actions/runs/26146795759"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1",
      "date": "2026-05-20T07:04:50.000Z",
      "distro": "noble",
      "commit": "732ad84d28fd53ffcf9d2846ca297913c62368ea",
      "fileid": "96632edfb67c03bc402f29d6af1ba1b892d849df24ae60858e0f9efb3142c18a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/samarendra88/actions/runs/26146795759"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1",
      "date": "2026-05-20T07:05:23.000Z",
      "commit": "732ad84d28fd53ffcf9d2846ca297913c62368ea",
      "fileid": "cb4555ade5bdf7ef0696e5f945c092d3c1c9785bd4f162f925233426a38752c5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/samarendra88/actions/runs/26146795759"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1",
      "date": "2026-05-20T07:04:55.000Z",
      "commit": "732ad84d28fd53ffcf9d2846ca297913c62368ea",
      "fileid": "6f5cd71c5ca47eefdf61af6f3c29167c264b3e325bb8ef73d2a56dcabf3c45ef",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/samarendra88/actions/runs/26146795759"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1",
      "date": "2026-05-20T07:06:02.000Z",
      "commit": "732ad84d28fd53ffcf9d2846ca297913c62368ea",
      "fileid": "cca1ed9d63a044ac53e5fc35086627b8abe7c4b42fa7606b9edef139b7159f0b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/samarendra88/actions/runs/26146795759"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1",
      "date": "2026-05-20T07:04:21.000Z",
      "commit": "732ad84d28fd53ffcf9d2846ca297913c62368ea",
      "fileid": "f30965df5bfc25aeddcadb4d37dbea303a501549a916b4974c0db67dbad43dbc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/samarendra88/actions/runs/26146795759"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1",
      "date": "2026-05-20T07:04:27.000Z",
      "commit": "732ad84d28fd53ffcf9d2846ca297913c62368ea",
      "fileid": "419c52283ee1e614e284aaaa2ddb2b4b57ffe306ae81edc17f987b8d0130a621",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/samarendra88/actions/runs/26146795759"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1",
      "date": "2026-06-02T13:57:20.000Z",
      "commit": "732ad84d28fd53ffcf9d2846ca297913c62368ea",
      "fileid": "7a3cfa606f05688cd76c874532359caaa604c2784c6d16121b4a7746d7a1768b",
      "status": "success",
      "buildurl": "https://github.com/r-universe/samarendra88/actions/runs/26146795759"
    }
  ]
}